System Design - How Best to Protect an API

Published on 27 Nov 2025
system design interview Web API

APIs are the backbone of modern applications, enabling communication between clients, services, and third-party systems. Because they expose business logic and data over the network, APIs are also a prime attack surface.

Protecting an API is not about a single security feature—it’s about defense in depth. A well-designed API security strategy combines authentication, authorization, traffic control, encryption, and observability. In this article, we’ll explore the most important techniques used to protect APIs in real-world systems and system design interviews.


1. Authentication & Authorization

The first step in protecting an API is knowing who is calling it and what they’re allowed to do.

Authentication verifies the identity of the caller.

  • Common approaches include API keys, OAuth 2.0, JWTs, and OpenID Connect.

  • Tokens should be short-lived and securely stored.

Authorization determines what actions the authenticated user can perform.

  • Enforced at the endpoint or service level.

  • Prevents unauthorized access to sensitive resources.

Best practices:

  • Never trust client-side validation alone.

  • Rotate credentials regularly.

  • Use scopes or claims to limit access.


2. Role-Based Access Control (RBAC)

RBAC is a structured way to manage authorization at scale.

How it works:

  • Users are assigned roles (e.g., admin, user, read-only).

  • Roles map to a predefined set of permissions.

  • APIs check roles before allowing access to protected actions.

Benefits:

  • Simplifies permission management.

  • Reduces risk of over-privileged access.

  • Easy to audit and reason about.

When to use:
RBAC is especially effective for internal APIs and enterprise systems with clearly defined user roles.


3. API Gateways & WAFs

An API gateway acts as the front door to your system.

API Gateway responsibilities:

  • Authentication and token validation

  • Rate limiting and throttling

  • Request routing and transformation

  • Logging and metrics

A Web Application Firewall (WAF) adds another security layer by:

  • Blocking common attacks (SQL injection, XSS).

  • Filtering malicious traffic patterns.

  • Enforcing security rules at the edge.

Why they matter:
Gateways and WAFs centralize security, reducing duplication and configuration errors across services.


4. Encryption with HTTPS

All API communication should be encrypted.

Why HTTPS is essential:

  • Protects data in transit from eavesdropping.

  • Prevents man-in-the-middle attacks.

  • Ensures data integrity and authenticity.

Best practices:

  • Enforce HTTPS everywhere—no exceptions.

  • Use strong TLS configurations.

  • Rotate certificates automatically.

Encryption is non-negotiable for any production API.


5. Monitoring & Alerting

You can’t protect what you can’t see.

What to monitor:

  • Request rates and error rates

  • Authentication failures

  • Unusual traffic patterns

  • Latency spikes

Alerting helps you:

  • Detect attacks early.

  • Respond quickly to incidents.

  • Identify misconfigurations or abuse.

Common tools:

  • Metrics platforms (Prometheus, Datadog)

  • Logging systems (ELK stack)

  • Alerting tools (PagerDuty, Opsgenie)


6. Rate Limiting & Throttling

Rate limiting protects APIs from abuse and accidental overload.

How it works:

  • Restricts how many requests a client can make in a given time window.

  • Applies per user, IP, API key, or token.

Benefits:

  • Prevents denial-of-service attacks.

  • Ensures fair usage.

  • Protects downstream services.

Where to enforce it:

  • API gateways

  • Load balancers

  • CDN edges


Summary

Protecting an API requires a layered security approach:

  • Authentication and authorization ensure only valid users gain access.

  • RBAC provides structured and scalable permission management.

  • API gateways and WAFs centralize and enforce security policies.

  • HTTPS encryption secures data in transit.

  • Monitoring and alerting enable rapid detection and response.

  • Rate limiting and throttling prevent abuse and overload.

In system design interviews and real-world architectures alike, the goal is not just to block attackers, but to build resilient APIs that fail safely, scale securely, and remain observable under pressure.